Functional medicine uses advanced GI testing

GI Testing: How We Decode Bloating, Constipation, and IBS for Real Relief

July 15, 20256 min read

Bloating, constipation, and IBS aren't just annoying—they're messages from your gut. Learn how functional medicine uses the GI-MAP test to identify root causes and restore long-term digestive health.


Introduction: Digestive Symptoms Are Common—But Not Normal

Let’s face it—digestive issues are everywhere.

Gas, bloating, constipation, diarrhea, reflux, and a revolving door of diets and digestive aids have become so common that many people assume they’re just a part of life.

You’ve probably heard things like:

  • “Everyone gets bloated.”

  • “It’s probably just stress.”

  • “Just take some probiotics.”

  • “Try cutting out gluten.”

But these are not real solutions. They’re temporary fixes or hopeful guesses.

Functional medicine takes a different approach: we test, not guess. Using advanced GI testing like the GI-MAP, we can uncover the root causes of your gut symptoms and design a targeted healing strategy—so you can stop surviving and start thriving.


Part 1: Why Gut Health Is at the Core of So Many Symptoms

Your gut does so much more than digest food.

It influences:

  • Your immune system (70% of it lives in the gut)

  • Hormone balance

  • Brain function and mood (via the gut-brain axis)

  • Detoxification

  • Nutrient absorption

  • Inflammatory responses

So when your gut is off—even a little—it can affect everything.

Chronic bloating or irregular stools are more than an inconvenience. They're signs that your microbiome is out of balance, your gut lining may be inflamed, and your immune system could be overworked.

What triggers this dysfunction?

  • Antibiotic use

  • Stress and cortisol imbalance

  • Food sensitivities

  • Environmental toxins

  • Poor diet or nutrient deficiencies

  • Gut infections (parasites, bacteria, yeast)

The good news? Once we know what’s wrong, we can support your body’s natural ability to heal.


Part 2: What Is the GI-MAP Test and What Does It Measure?

The GI-MAP (Gastrointestinal Microbial Assay Plus) is a DNA-based stool test that uses qPCR technology to assess your gut microbiome with high accuracy and sensitivity.

Unlike conventional stool tests that just look for pathogens, the GI-MAP shows us a full ecosystem picture—what’s overgrown, what’s missing, and how your gut is functioning overall.

Here’s what it includes:


🧫 1. Pathogens and Parasites

The test screens for:

  • Bacterial pathogens (e.g., Salmonella, C. difficile, Campylobacter)

  • Parasitic pathogens (e.g., Giardia, Entamoeba histolytica, Cryptosporidium)

  • Viral pathogens (e.g., Norovirus, Rotavirus)

Why it matters:
Even low-level pathogens can cause ongoing inflammation, diarrhea, pain, and fatigue—especially when undetected for years.


🦠 2. Bacterial Overgrowth and Deficiencies

You need a healthy balance of bacteria for digestion, immune function, and inflammation control.

The GI-MAP tests for:

  • Commensal (good) bacteria like Lactobacillus and Bifidobacterium

  • Opportunistic bacteria that can overgrow under stress

  • H. pylori, a bacterium linked to ulcers, reflux, and bloating

Why it matters:
Too much or too little of key microbes affects everything from bowel habits to nutrient absorption to mental health.


🍄 3. Yeast and Fungal Overgrowth

Candida and other yeast/fungal species are assessed, which can trigger:

  • Bloating and sugar cravings

  • Skin issues

  • Brain fog

  • Fatigue

Why it matters:
Overgrowth often follows antibiotics or high sugar diets and requires antifungal support—not just probiotics.


🧪 4. Leaky Gut Markers (Zonulin, Anti-gliadin, SIgA)

The GI-MAP tests for:

  • Zonulin: protein regulating gut barrier permeability

  • Anti-gliadin IgA: marker of immune reaction to gluten

  • Secretory IgA: marker of gut immune strength

Why it matters:
Leaky gut lets toxins and microbes escape the intestine, triggering widespread inflammation and autoimmunity.


🔥 5. Enzymes, Immunity, and Inflammation

Other vital markers include:

  • Elastase: pancreatic enzyme status

  • Steatocrit: fat in stool (malabsorption)

  • Beta-glucuronidase: affects estrogen recycling

  • Calprotectin: intestinal inflammation

Why it matters:
These markers tell us how well you’re digesting, how inflamed your gut is, and whether you’re absorbing nutrients effectively.


Part 3: Case Studies – What GI Testing Reveals That Other Tests Miss

🌟 Case 1: Sarah, 34 – Constant Bloating and Brain Fog

  • History: Tried gluten-free, dairy-free diets. Took probiotics. Still bloated.

  • GI-MAP:

    • Low Lactobacillus and Bifidobacterium

    • Candida albicans overgrowth

    • Elevated Beta-glucuronidase

  • Plan: Antifungal support, prebiotic fiber, hormone detox support

  • Result: 90% reduction in bloating, regular periods, and clear thinking within 8 weeks.


🌟 Case 2: Mike, 48 – Chronic Constipation and Fatigue

  • History: Stool irregularity for 5 years. Low B12 and ferritin.

  • GI-MAP:

    • H. pylori positive with virulence factors

    • Low Elastase (pancreatic enzyme deficiency)

    • Low SIgA

  • Plan: H. pylori eradication protocol, enzyme support, gut immune boosters

  • Result: Daily bowel movements restored, energy returned, ferritin rose naturally.


🌟 Case 3: Rachel, 26 – IBS and Skin Issues

  • History: Diagnosed with IBS. Eczema flare-ups and frequent nausea.

  • GI-MAP:

    • Elevated zonulin (leaky gut)

    • Clostridia overgrowth

    • High calprotectin (inflammation)

  • Plan: Gut lining repair, Clostridia modulation, low-inflammatory diet

  • Result: Eczema cleared, no more nausea, normal stool within 10 weeks.


Part 4: Personalized Gut Healing Protocols Based on Your Results

Once we know what’s happening in your gut, we can customize a precise treatment strategy tailored to your root causes—not just your symptoms.


💊 1. Antimicrobials or Probiotics?

We don’t guess. Some people need targeted antimicrobials (herbal or pharmaceutical) to clear overgrowth or pathogens. Others need probiotic support to restore beneficial bacteria.

We choose:

  • Specific herbs (e.g., berberine, oregano, caprylic acid)

  • Probiotics matched to your deficiencies

  • Prebiotics to feed beneficial flora (or not, if SIBO suspected)


🛡️ 2. Supporting the Mucosal Barrier

A strong gut lining keeps toxins and pathogens out of circulation.

We use:

  • L-glutamine

  • Slippery elm

  • Marshmallow root

  • Zinc carnosine

  • Immunoglobulin therapy

  • SIgA support (like colostrum or beta-glucans)


🍽️ 3. Rebuilding Digestion with Enzymes and Binders

Low pancreatic output and bile flow lead to bloating and malabsorption.

We may recommend:

  • Digestive enzymes

  • Ox bile

  • HCl (hydrochloric acid) for low stomach acid

  • Binders (like charcoal or bentonite) for toxins or die-off support


🥗 4. Diet and Lifestyle for Gut Repair

Gut healing isn’t just about supplements—it’s about nourishment and nervous system health.

We may suggest:

  • Short-term elimination diets (gluten, dairy, FODMAPs)

  • Gut-soothing soups and cooked vegetables

  • Bone broth or collagen for lining repair

  • Vagal nerve toning (breathwork, humming, gargling)

  • Stress reduction to lower cortisol (which inflames the gut)

Everything is personalized based on your unique GI-MAP results.


Part 5: How GI Testing Transforms More Than Digestion

Many patients come to us for gut symptoms—but leave with total body transformation. Why?

Because the gut is connected to:

  • Mood: via serotonin, dopamine, GABA production

  • Hormones: especially estrogen detox and thyroid function

  • Immune health: as the primary immune system interface

  • Inflammation and autoimmunity: via gut permeability

  • Skin health: like eczema, acne, rosacea

  • Weight and metabolism: through microbiome composition

GI testing doesn’t just fix digestion—it upgrades your entire health ecosystem.


Conclusion: You Don’t Have to Live with Bloating or IBS Anymore

If you’re tired of bloating after meals, irregular bathroom habits, and trying every elimination diet under the sun—it’s time to get answers.

The GI-MAP test reveals the true root causes behind your symptoms, so we can build a healing plan that works for you.

📊 No more guessing.
📦 No more symptom-chasing.
🧬 Just data-driven, personalized care that finally makes a difference.

📅 Schedule your GI testing consultation today and let’s decode your digestion for lasting relief.

Dr. Jamie Grainger, DC, IHFMP is a functional medicine practitioner and chiropractor with over a decade of experience helping women uncover the root causes of chronic health issues—like fatigue, hormone imbalances, and gut problems—and create personalized plans for true healing. At Ultimate Functional Medicine, Dr. Jamie empowers patients to take control of their health through advanced testing, natural solutions, and compassionate, root-cause care.

Dr. Jamie Grainger DC, IHFMP

Dr. Jamie Grainger, DC, IHFMP is a functional medicine practitioner and chiropractor with over a decade of experience helping women uncover the root causes of chronic health issues—like fatigue, hormone imbalances, and gut problems—and create personalized plans for true healing. At Ultimate Functional Medicine, Dr. Jamie empowers patients to take control of their health through advanced testing, natural solutions, and compassionate, root-cause care.

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